Basic Information
Locus ID:
Pt_Chr0103206
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 103348820 | 103371411 | - | Pt_Chr0103206 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.35 | 139,808.48 Da | 46.61 | 88.30 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 245 | 360 | 0.0024757 | IPR002083 |
| CDD | cd00121 | MATH | 1028 | 1155 | 1.01689E-8 | IPR002083 |
| CDD | cd00121 | MATH | 756 | 895 | 9.9645E-8 | IPR002083 |
| CDD | cd00121 | MATH | 35 | 160 | 2.9577E-6 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 188 | 238 | 9.0E-9 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 926 | 1010 | 4.3E-17 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 1184 | 1242 | 1.2E-8 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 387 | 462 | 6.1E-20 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 244 | 365 | 1.42E-5 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 913 | 999 | 3.93E-22 | IPR011333 |
| SUPERFAMILY | SSF54695 | POZ domain | 178 | 238 | 2.49E-14 | IPR011333 |
| SUPERFAMILY | SSF54695 | POZ domain | 378 | 578 | 1.15E-29 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 34 | 164 | 5.56E-15 | - |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 1025 | 1160 | 1.6E-13 | - |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 750 | 899 | 9.48E-12 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 1171 | 1242 | 1.15E-14 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 169 | 255 | 2.9E-16 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 1163 | 1244 | 2.2E-17 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 549 | 624 | 8.0E-16 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 34 | 164 | 1.1E-11 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 374 | 542 | 2.8E-33 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 1029 | 1159 | 5.6E-13 | IPR008974 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 754 | 899 | 2.1E-9 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 906 | 1028 | 6.6E-26 | IPR011333 |
| SMART | SM00225 | BTB_4 | 197 | 306 | 13.0 | IPR000210 |
| SMART | SM00225 | BTB_4 | 397 | 549 | 5.5E-20 | IPR000210 |
| SMART | SM00225 | BTB_4 | 934 | 1030 | 4.5E-13 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 30 | 159 | 10.623393 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 197 | 262 | 11.812468 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 1192 | 1240 | 10.757686 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 397 | 460 | 18.16184 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 1023 | 1154 | 10.444407 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 934 | 1001 | 16.486599 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 614 | 631 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 614 | 647 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_044424668.1 | BTB/POZ and MATH domain-containing protein 1-like [Triticum aestivum] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | M7YQN2 | BTB/POZ and MATH domain-containing protein 1 OS=Triticum urartu OX=4572 GN=TRIUR3_11315 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology