Basic Information
Locus ID:
Pt_Chr0103075
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 97476249 | 97477882 | + | Pt_Chr0103075 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.56 | 36,298.94 Da | 49.35 | 106.06 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 23 | 60 | 3.5E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 21 | 72 | 1.57E-12 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 20 | 67 | 8.1E-9 | - |
| SMART | SM00256 | fbox_2 | 27 | 66 | 0.0026 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 21 | 57 | 9.206031 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G69630.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_037485717.1 | MEIOTIC F-BOX protein MOF-like isoform X1 [Triticum dicoccoides] | 0 |
| Q9FWZ1 | F-box/LRR-repeat protein 13 OS=Arabidopsis thaliana OX=3702 GN=FBL13 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6C7Q2 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology