Basic Information
Locus ID:
Pt_Chr0103074
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 97427459 | 97428852 | + | Pt_Chr0103074 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.63 | 40,967.14 Da | 48.68 | 94.23 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 24 | 61 | 1.6E-5 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 151 | 354 | 7.85E-8 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 15 | 91 | 7.72E-11 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 137 | 357 | 1.7E-7 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 22 | 68 | 3.5E-5 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25850.1 | F-box/RNI-like/FBD-like domains-containing protein. | 0 |
| RefSeq | XP_037485719.1 | MEIOTIC F-BOX protein MOF-like isoform X2 [Triticum dicoccoides] | 0 |
| Q3E944 | Putative F-box/FBD/LRR-repeat protein At5g25850 OS=Arabidopsis thaliana OX=3702 GN=At5g25850 PE=4 SV=1 | 0 | |
| TrEMBL | A0A3B6C7Q2 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology