Basic Information
Locus ID:
Pt_Chr0103039
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 95877395 | 95914705 | - | Pt_Chr0103039 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.77 | 270,294.00 Da | 43.81 | 89.22 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 56 | 99 | 0.0074 | IPR001810 |
| Pfam | PF03478 | Protein of unknown function (DUF295) | 767 | 805 | 8.7E-6 | IPR005174 |
| Pfam | PF03478 | Protein of unknown function (DUF295) | 1146 | 1193 | 1.2E-5 | IPR005174 |
| Pfam | PF00646 | F-box domain | 1250 | 1274 | 0.0093 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1824 | 1845 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1816 | 1872 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1854 | 1872 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 431 | 479 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 465 | 479 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051226773.1 | uncharacterized protein LOC127344513 [Lolium perenne] | 0 |
| TrEMBL | A0A3B6FWH3 | DUF295 domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology