Basic Information
Locus ID:
Pt_Chr0103030
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Protein-only RNase P
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 95686790 | 95689863 | + | Pt_Chr0103030 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.82 | 59,689.35 Da | 48.08 | 74.00 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 11 | 225 | 2.6E-72 | IPR033443 |
| Pfam | PF16953 | Protein-only RNase P | 268 | 495 | 3.1E-60 | IPR031595 |
| Gene3D | G3DSA:3.40.50.11980 | - | 284 | 461 | 4.1E-187 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 19 | 496 | 4.1E-187 | IPR011990 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 506 | 547 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 506 | 531 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16650.1 | proteinaceous RNase P 2. | 0 |
| RefSeq | XP_037408616.1 | proteinaceous RNase P 2-like [Triticum dicoccoides] | 0 |
| Q680B9 | Proteinaceous RNase P 2 OS=Arabidopsis thaliana OX=3702 GN=PRORP2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8R7PY70 | ribonuclease P OS=Triticum urartu OX=4572 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology