halophFGD

Basic Information

Locus ID: Pt_Chr0102919

Species & Taxonomic ID: Puccinellia tenuiflora & 240906

Genome Assembly: GCA_012064385.1

Description: Inactive receptor kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Chr01	86987156	86989918	-	Pt_Chr0102919

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.27	39,975.93 Da	58.97	93.71	-0.15

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	142	352	6.5E-15	IPR001245
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	116	353	1.01E-30	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	165	356	4.0E-35	-
ProSiteProfiles	PS50011	Protein kinase domain profile.	36	356	15.199011	IPR000719

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G48480.1	receptor-like kinase 1. Arabidopsis thaliana receptor-like protein kinase (RKL1) gene
RefSeq	XP_051214789.1	serine/threonine-protein kinase PBL27-like isoform X1 [Lolium perenne]
Swiss-Prot	Q9LP77	Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1
TrEMBL	A0A453D7J0	Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Puccinellia tenuiflora	1	Pt_Chr0102919
Poaceae	Triticum aestivum	1	TraesCS2B02G538300.1
Solanaceae	Solanum chilense	1	SOLCI002349100
Solanaceae	Solanum pennellii	1	gene-LOC107028108