Basic Information
Locus ID:
Pt_Chr0102884
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 84617256 | 84620764 | + | Pt_Chr0102884 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 107,960.12 Da | 43.66 | 91.25 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 673 | 961 | 1.0794E-89 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 34 | 70 | 2.4E-6 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 256 | 316 | 5.5E-9 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 670 | 958 | 1.4E-40 | IPR001245 |
| SUPERFAMILY | SSF52047 | RNI-like | 79 | 437 | 1.33E-57 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 376 | 557 | 2.18E-29 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 666 | 959 | 2.56E-68 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 179 | 327 | 6.6E-29 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 666 | 756 | 8.9E-14 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 328 | 582 | 5.8E-65 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 169 | 6.5E-28 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 757 | 980 | 6.2E-59 | - |
| SMART | SM00369 | LRR_typ_2 | 205 | 229 | 37.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 97 | 121 | 270.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 667 | 960 | 8.8E-25 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 492 | 516 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 303 | 327 | 13.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 667 | 960 | 35.665043 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 811 | 823 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 673 | 700 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 966 | 1013 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_044341176.1 | receptor-like protein kinase 5 [Triticum aestivum] | 0 |
| O49545 | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 OS=Arabidopsis thaliana OX=3702 GN=BAM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6EI49 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology