Basic Information
Locus ID:
Pt_Chr0102732
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
NAC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 76354089 | 76356294 | + | Pt_Chr0102732 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.27 | 22,414.39 Da | 50.90 | 74.85 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14358 | UBA_NAC_euk | 169 | 205 | 3.73613E-15 | - |
| Pfam | PF19026 | HYPK UBA domain | 167 | 204 | 8.3E-12 | IPR044034 |
| Pfam | PF01849 | NAC domain | 67 | 122 | 4.3E-22 | IPR002715 |
| Gene3D | G3DSA:2.20.70.30 | - | 73 | 126 | 1.6E-30 | IPR038187 |
| Gene3D | G3DSA:1.10.8.10 | - | 167 | 204 | 2.2E-17 | - |
| SMART | SM01407 | NAC_2 | 67 | 123 | 2.7E-25 | IPR002715 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 64 | 129 | 17.445648 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 18 | 72 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 72 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 28 | 52 | - | - |
| Coils | Coil | Coil | 3 | 35 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12390.1 | Nascent polypeptide-associated complex (NAC), alpha subunit family protein. | 0 |
| RefSeq | XP_003557882.1 | nascent polypeptide-associated complex subunit alpha-like protein 1 [Brachypodium distachyon] | 0 |
| Q9LHG9 | Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12390 PE=1 SV=1 | 0 | |
| TrEMBL | I1H5F9 | NAC-A/B domain-containing protein OS=Brachypodium distachyon OX=15368 GN=100825644 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology