Basic Information
Locus ID:
Pt_Chr0102529
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Protein-only RNase P
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 67555141 | 67559779 | + | Pt_Chr0102529 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.97 | 64,381.10 Da | 50.40 | 74.24 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18671 | PIN_PRORP-Zc3h12a-like | 388 | 510 | 3.51847E-60 | - |
| Pfam | PF16953 | Protein-only RNase P | 330 | 556 | 1.1E-74 | IPR031595 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 83 | 290 | 5.6E-78 | IPR033443 |
| Gene3D | G3DSA:3.40.50.11980 | - | 348 | 522 | 7.1E-221 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 90 | 559 | 7.1E-221 | IPR011990 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 39 | 56 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 29 | 92 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 566 | 587 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32230.1 | proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. | 0 |
| RefSeq | XP_047080980.1 | proteinaceous RNase P 1, chloroplastic/mitochondrial-like [Lolium rigidum] | 0 |
| Q66GI4 | Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1 | 0 | |
| TrEMBL | I1J3V2 | ribonuclease P OS=Brachypodium distachyon OX=15368 GN=100821676 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology