Basic Information
Locus ID:
Pt_Chr0102435
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 64993145 | 64996853 | - | Pt_Chr0102435 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.05 | 54,346.20 Da | 52.53 | 78.97 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 219 | 472 | 4.0E-13 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 200 | 473 | 1.57E-29 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 299 | 480 | 1.2E-22 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 193 | 298 | 3.8E-14 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 216 | 477 | 13.616002 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 130 | 144 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 66 | 147 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 84 | 118 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 66 | 83 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G18640.1 | Leucine-rich repeat protein kinase family protein. Required for root hair elongation during tip growth. | 0 |
| RefSeq | XP_047086621.1 | protein MALE DISCOVERER 2-like isoform X2 [Lolium rigidum] | 0 |
| C0LGQ4 | Protein MALE DISCOVERER 2 OS=Arabidopsis thaliana OX=3702 GN=MDIS2 PE=1 SV=1 | 0 | |
| TrEMBL | I1H6H8 | Protein kinase domain-containing protein OS=Brachypodium distachyon OX=15368 GN=100826272 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology