Basic Information
Locus ID:
Pt_Chr0102428
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the TPP enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 64814121 | 64817031 | - | Pt_Chr0102428 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.48 | 39,843.93 Da | 34.91 | 93.41 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd07038 | TPP_PYR_PDC_IPDC_like | 49 | 210 | 5.92401E-96 | - |
| Pfam | PF02776 | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain | 47 | 216 | 8.4E-37 | IPR012001 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 46 | 225 | 7.62E-46 | IPR029061 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 258 | 370 | 2.59E-16 | IPR029061 |
| Gene3D | G3DSA:3.40.50.970 | - | 43 | 219 | 3.5E-62 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 256 | 357 | 2.3E-24 | - |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 22 | 5.0 | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01320.1 | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein. | 0 |
| RefSeq | XP_047086625.1 | pyruvate decarboxylase 2-like [Lolium rigidum] | 0 |
| A2XFI3 | Pyruvate decarboxylase 2 OS=Oryza sativa subsp. indica OX=39946 GN=PDC2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A835EE33 | pyruvate decarboxylase OS=Digitaria exilis OX=1010633 GN=HU200_044746 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology