Basic Information
Locus ID:
Pt_Chr0102426
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the TPP enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 64786424 | 64797932 | - | Pt_Chr0102426 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.07 | 67,879.65 Da | 32.23 | 85.33 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd07038 | TPP_PYR_PDC_IPDC_like | 72 | 233 | 1.62112E-90 | - |
| CDD | cd02005 | TPP_PDC_IPDC | 431 | 613 | 7.65502E-86 | - |
| Pfam | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 476 | 601 | 1.3E-14 | IPR011766 |
| Pfam | PF02776 | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain | 70 | 237 | 7.1E-36 | IPR012001 |
| Pfam | PF00205 | Thiamine pyrophosphate enzyme, central domain | 266 | 378 | 3.4E-18 | IPR012000 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 431 | 625 | 3.4E-39 | IPR029061 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 69 | 247 | 1.23E-43 | IPR029061 |
| SUPERFAMILY | SSF52467 | DHS-like NAD/FAD-binding domain | 255 | 408 | 9.82E-30 | IPR029035 |
| Gene3D | G3DSA:3.40.50.970 | - | 66 | 242 | 1.2E-60 | - |
| Gene3D | G3DSA:3.40.50.1220 | - | 256 | 418 | 9.4E-39 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 424 | 612 | 1.7E-54 | - |
| PIRSF | PIRSF036565 | Pyruvt_ip_decrb | 63 | 625 | 5.0E-206 | IPR012110 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 15 | - | - |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33070.1 | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein. | 0 |
| RefSeq | XP_047084261.1 | pyruvate decarboxylase 2-like [Lolium rigidum] | 0 |
| A2XFI3 | Pyruvate decarboxylase 2 OS=Oryza sativa subsp. indica OX=39946 GN=PDC2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2K2DTH6 | pyruvate decarboxylase OS=Brachypodium distachyon OX=15368 GN=BRADI_1g65440v3 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology