Basic Information
Locus ID:
Pt_Chr0102348
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 62060232 | 62068192 | + | Pt_Chr0102348 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.95 | 127,339.84 Da | 48.27 | 78.25 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd15489 | PHD_SF | 851 | 913 | 7.85353E-4 | - |
| CDD | cd04301 | NAT_SF | 1017 | 1058 | 6.2993E-4 | - |
| Pfam | PF16135 | Tify domain binding domain | 441 | 494 | 5.3E-8 | IPR032308 |
| Pfam | PF16135 | Tify domain binding domain | 744 | 794 | 1.5E-16 | IPR032308 |
| SUPERFAMILY | SSF55729 | Acyl-CoA N-acyltransferases (Nat) | 993 | 1082 | 1.68E-10 | IPR016181 |
| Gene3D | G3DSA:3.40.630.30 | - | 951 | 1098 | 7.9E-8 | - |
| SMART | SM00249 | PHD_3 | 851 | 914 | 0.0022 | IPR001965 |
| ProSiteProfiles | PS51186 | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 946 | 1099 | 11.620133 | IPR000182 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 682 | 709 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 107 | 127 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 48 | 78 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 634 | 660 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 626 | 660 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G37520.1 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain. | 0 |
| RefSeq | XP_047084117.1 | uncharacterized protein LOC124695305 [Lolium rigidum] | 0 |
| TrEMBL | A0A3B6JLH9 | N-acetyltransferase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology