Basic Information
Locus ID:
Pt_Chr0102307
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 60836649 | 60839169 | + | Pt_Chr0102307 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.55 | 15,798.19 Da | 67.09 | 91.54 | -0.32 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G29180.1 | 0 | |
| RefSeq | XP_044375706.1 | uncharacterized protein LOC123097922 [Triticum aestivum] | 0 |
| TrEMBL | A0A3B6JLM8 | Uncharacterized protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg25384 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_6977 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah027990 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_7g173480 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg1710, Sbi_jg34838 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg3034 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00003235 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl73068, Sgl76454 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.7AG0003200, CQ.Regalona.r1.9BG0002430 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30063000 |
| Apiaceae | Apium graveolens | 1 | Ag11G04194 |
| Arecaceae | Cocos nucifera | 1 | COCNU_04G015680 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103715664 |
| Asteraceae | Flaveria trinervia | 1 | Ftri12G18708 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT2G29180.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10017315m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp4g11990.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB08g031150.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq08G2096 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl08G2191 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno04g17610 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG09.1233 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00016214 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb7G33170 |
| Poaceae | Echinochloa crus-galli | 3 | AH01.4192, BH01.4507, CH01.4802 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_3AG0242720, gene-QOZ80_3BG0285470 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.4HG0388700.1 |
| Poaceae | Oryza coarctata | 2 | Oco05G009410, Oco06G009760 |
| Poaceae | Oryza sativa | 1 | LOC_Os03g16470.3 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G403100 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0102277, Pt_Chr0102307 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr04G007650, Chr07G003970 |
| Poaceae | Thinopyrum elongatum | 1 | Tel4E01G367300 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC4BG037320 |
| Poaceae | Triticum aestivum | 3 | TraesCS4A02G095600.1, TraesCS4B02G209000.1 ... |
| Poaceae | Zea mays | 6 | Zm00001eb214060_P001, Zm00001eb299580_P001 ... |
| Poaceae | Zoysia japonica | 2 | nbis-gene-2099, nbis-gene-3765 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g3935 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG19.885, evm.TU.LG24.882 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc01g38730 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_12_RagTag.223 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-24579 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-20856 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-19507 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000027l.433 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00017884 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-18946 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-11732 |
| Salicaceae | Populus euphratica | 2 | populus_peu02093, populus_peu35705 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132641781 |
| Solanaceae | Solanum chilense | 1 | SOLCI005143600 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107018729 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.7696_chr05_+ |
| Tamaricaceae | Tamarix chinensis | 1 | TC11G2063 |
| Zosteraceae | Zostera marina | 1 | Zosma03g20590.v3.1 |