Basic Information
Locus ID:
Pt_Chr0101900
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 46803691 | 46807184 | + | Pt_Chr0101900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.14 | 47,385.19 Da | 42.59 | 83.57 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 171 | 403 | 9.48888E-88 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 199 | 401 | 4.8E-32 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 150 | 414 | 3.33E-68 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 140 | 209 | 2.7E-13 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 210 | 414 | 2.0E-63 | - |
| SMART | SM00220 | serkin_6 | 165 | 401 | 1.5E-20 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 103 | 409 | 26.803024 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 171 | 193 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 252 | 264 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 411 | 445 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 73 | 89 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 63 | 89 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G34500.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_047083942.1 | probable receptor-like serine/threonine-protein kinase At4g34500 [Lolium rigidum] | 0 |
| Q6NKZ9 | Probable receptor-like serine/threonine-protein kinase At4g34500 OS=Arabidopsis thaliana OX=3702 GN=At4g34500 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8I6Y2W2 | Protein kinase domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology