halophFGD

Basic Information

Locus ID: Pt_Chr0101843

Species & Taxonomic ID: Puccinellia tenuiflora & 240906

Genome Assembly: GCA_012064385.1

Description: Protein tyrosine kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Chr01	44458563	44459201	+	Pt_Chr0101843

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.60	23,592.65 Da	50.05	96.51	-0.06

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00069	Protein kinase domain	3	171	8.3E-22	IPR000719
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	3	178	8.97E-38	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	1	193	1.1E-38	-
ProSiteProfiles	PS50011	Protein kinase domain profile.	1	212	22.195339	IPR000719

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

KEGG Pathway

KO Term:

K04730 (interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G55950.1	CRINKLY4 related 3.
RefSeq	XP_047061252.1	probable serine/threonine-protein kinase PBL25 [Lolium rigidum]
Swiss-Prot	Q9LY50	Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana OX=3702 GN=CCR3 PE=2 SV=1
TrEMBL	A0A3B6GKE5	Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Puccinellia tenuiflora	2	Pt_Chr0101843, Pt_Chr0600173