Basic Information
Locus ID:
Pt_Chr0101842
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 44445667 | 44449184 | + | Pt_Chr0101842 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.30 | 70,041.97 Da | 41.11 | 93.98 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 377 | 641 | 1.0591E-87 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 65 | 1.3E-8 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 374 | 635 | 8.4E-33 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 83 | 129 | 2.6E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 375 | 636 | 1.05E-55 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 48 | 212 | 4.54E-33 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 359 | 445 | 2.8E-18 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 140 | 215 | 5.0E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 139 | 6.2E-28 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 446 | 657 | 3.2E-46 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 371 | 651 | 29.714628 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 377 | 399 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 630 | 644 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 624 | 666 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48480.1 | receptor-like kinase 1. Arabidopsis thaliana receptor-like protein kinase (RKL1) gene | 0 |
| RefSeq | XP_051182482.1 | probable inactive receptor kinase RLK902 [Lolium perenne] | 0 |
| Q9LP77 | Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1 | 0 | |
| TrEMBL | I1H7Y1 | Protein kinase domain-containing protein OS=Brachypodium distachyon OX=15368 GN=100824734 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology