Basic Information
Locus ID:
Pt_Chr0101797
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 43042855 | 43046442 | + | Pt_Chr0101797 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.20 | 53,514.27 Da | 36.38 | 92.50 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 26 | 346 | 5.2E-80 | IPR000490 |
| Pfam | PF07983 | X8 domain | 364 | 434 | 7.6E-18 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 26 | 347 | 3.9E-87 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 357 | 448 | 3.0E-9 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 25 | 352 | 2.0E-114 | - |
| SMART | SM00768 | X8_cls | 363 | 448 | 1.9E-46 | IPR012946 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01630.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_044982373.1 | glucan endo-1,3-beta-glucosidase 3-like [Hordeum vulgare subsp. vulgare] | 0 |
| Q9ZU91 | Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana OX=3702 GN=At2g01630 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8I6XH45 | X8 domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology