Basic Information
Locus ID:
Pt_Chr0101795
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Homocysteine S-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 42980282 | 42983104 | + | Pt_Chr0101795 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.94 | 35,183.84 Da | 40.53 | 91.63 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 18 | 319 | 6.9E-75 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 14 | 322 | 9.42E-81 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 6 | 318 | 9.1E-98 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 5 | 255 | 1.3E-6 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 274 | 325 | 0.14 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 5 | 319 | 50.547829 | IPR003726 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25900.1 | Homocysteine S-methyltransferase family protein. | 0 |
| RefSeq | XP_044982378.1 | homocysteine S-methyltransferase 1 [Hordeum vulgare subsp. vulgare] | 0 |
| Q9FUN0 | Homocysteine S-methyltransferase 1 OS=Zea mays OX=4577 GN=HMT-1 PE=2 SV=1 | 0 | |
| TrEMBL | F2D1S5 | Predicted protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology