Basic Information
Locus ID:
Pt_Chr0101595
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 37348836 | 37349770 | - | Pt_Chr0101595 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.53 | 34,162.90 Da | 54.11 | 83.04 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 45 | 274 | 5.7E-44 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 41 | 282 | 9.98E-52 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 37 | 285 | 1.3E-49 | - |
| SMART | SM00220 | serkin_6 | 32 | 286 | 2.1E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 303 | 30.562668 | IPR000719 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 22 | 7.0 | - |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 146 | 158 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 9 | 24 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G01560.3 | - | 0 |
| RefSeq | XP_047085649.1 | putative cyclin-dependent kinase F-2 [Lolium rigidum] | 0 |
| Q2QSL4 | Putative cyclin-dependent kinase F-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKF-2 PE=3 SV=1 | 0 | |
| TrEMBL | A0A3B6HSJ3 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology