HalophFGD

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Basic Information
Locus ID: Pt_Chr0101289
Species & Taxonomic ID: Puccinellia tenuiflora & 240906
Genome Assembly: GCA_012064385.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
Chr01 28218489 28234099 + Pt_Chr0101289
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.68 123,106.79 Da 51.02 81.44 -0.25
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 733 774 0.0039 IPR001810
SUPERFAMILY SSF81383 F-box domain 358 417 6.54E-8 IPR036047
SUPERFAMILY SSF81383 F-box domain 731 794 1.11E-7 IPR036047
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_044398573.1 uncharacterized protein LOC123122435 [Triticum aestivum] 0
TrEMBL A0A453LI01 F-box domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Puccinellia tenuiflora 2 Pt_Chr0101289, Pt_Chr0400355
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.