Basic Information
Locus ID:
Pt_Chr0100992
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 20272166 | 20290920 | - | Pt_Chr0100992 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.59 | 112,357.99 Da | 52.86 | 96.92 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08387 | FBD | 425 | 462 | 2.9E-5 | IPR006566 |
| Pfam | PF00646 | F-box domain | 25 | 58 | 0.005 | IPR001810 |
| Pfam | PF12937 | F-box-like | 516 | 550 | 1.1E-5 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 14 | 62 | 2.22E-6 | IPR036047 |
| SUPERFAMILY | SSF81383 | F-box domain | 501 | 552 | 6.02E-9 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 512 | 556 | 5.2E-6 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 513 | 564 | 10.186324 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051230215.1 | uncharacterized protein LOC127348165 [Lolium perenne] | 0 |
| TrEMBL | M8BZ14 | F-box domain-containing protein OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology