Basic Information
Locus ID:
Pt_Chr0100935
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 18615890 | 18617073 | + | Pt_Chr0100935 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.45 | 43,532.41 Da | 46.79 | 82.61 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 13 | 45 | 3.9E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 12 | 47 | 1.13E-7 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 10 | 48 | 3.7E-8 | - |
| SMART | SM00256 | fbox_2 | 12 | 53 | 1.4E-6 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 103 | 290 | 9.2E-19 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 6 | 62 | 9.02057 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051229585.1 | F-box protein At3g07870-like [Lolium perenne] | 0 |
| TrEMBL | A0A3B6DM20 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology