Basic Information
Locus ID:
Pt_Chr0100559
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 10099142 | 10102699 | - | Pt_Chr0100559 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.24 | 55,389.55 Da | 63.94 | 82.19 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 254 | 457 | 5.8E-34 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 205 | 467 | 3.2E-68 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 262 | 475 | 3.9E-66 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 197 | 260 | 8.4E-13 | - |
| SMART | SM00220 | serkin_6 | 221 | 457 | 6.2E-16 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 185 | 462 | 28.032682 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 227 | 249 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 308 | 320 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 461 | 502 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 129 | 153 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 121 | 197 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 154 | 190 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G01540.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_047091821.1 | probable serine/threonine-protein kinase At1g01540 [Lolium rigidum] | 0 |
| Q3EDL4 | Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6KTH3 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology