Basic Information
Locus ID:
Pt_Chr0100276
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Protein of unknown function (DUF295)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 5114567 | 5115715 | + | Pt_Chr0100276 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.76 | 42,493.56 Da | 40.15 | 80.97 | -0.23 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_015634704.1 | uncharacterized protein LOC107280588 [Oryza sativa Japonica Group] | 0 |
| TrEMBL | Q7XQW2 | OSJNBb0050N09.7 protein OS=Oryza sativa subsp. japonica OX=39947 GN=OSJNBb0050N09.7 PE=4 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 14 | AH01.2523, AH09.173, AH09.174, BH05.2976, BH09.248, BH09.249 ... |
| Poaceae | Eleusine coracana subsp. coracana | 6 | gene-QOZ80_4AG0326860, gene-QOZ80_4AG0326870 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.2HG0216960.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 5 | gene-QYE76_008931, gene-QYE76_059393, gene-QYE76_071439 ... |
| Poaceae | Oryza coarctata | 4 | Oco07G000410, Oco07G000420, Oco08G001100, Oco08G001110 |
| Poaceae | Oryza sativa | 5 | LOC_Os04g08070.1, LOC_Os04g08110.1, LOC_Os04g08160.1 ... |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_06G024900, gene-BS78_09G061200 |
| Poaceae | Puccinellia tenuiflora | 5 | Pt_Chr0100159, Pt_Chr0100276, Pt_Chr0504713, Pt_Chr0600870 ... |
| Poaceae | Thinopyrum elongatum | 1 | Tel1E01G186700 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC7AG006610 |
| Poaceae | Triticum aestivum | 23 | TraesCS1B02G056200.1.cds1, TraesCS1D02G043800.1.cds1 ... |