Basic Information
Locus ID:
Pt_Chr0100206
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 3808405 | 3811506 | - | Pt_Chr0100206 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.82 | 109,491.55 Da | 31.66 | 101.34 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 65 | 7.2E-9 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 708 | 994 | 2.0E-41 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 525 | 584 | 8.9E-8 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 301 | 586 | 2.12E-55 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 703 | 997 | 5.74E-70 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 72 | 393 | 1.1E-61 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 306 | 624 | 1.9E-87 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 799 | 1020 | 1.5E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 305 | 2.1E-71 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 696 | 798 | 3.4E-16 | - |
| SMART | SM00369 | LRR_typ_2 | 547 | 571 | 75.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 706 | 997 | 1.3E-32 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 187 | 211 | 15.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 427 | 451 | 58.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 331 | 355 | 21.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 283 | 307 | 82.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 452 | 475 | 270.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 706 | 1024 | 36.739227 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 845 | 857 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 712 | 736 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 547 | 560 | 6.9E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 502 | 515 | 6.9E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_051182819.1 | MDIS1-interacting receptor like kinase 1-like [Lolium perenne] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8R7Q6D5 | Protein kinase domain-containing protein OS=Triticum urartu OX=4572 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology