Basic Information
Locus ID:
Pt_Chr0100092
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 1909130 | 1912234 | - | Pt_Chr0100092 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.75 | 109,547.60 Da | 31.87 | 101.24 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 66 | 7.9E-10 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 526 | 585 | 1.0E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 709 | 995 | 1.9E-41 | IPR000719 |
| SUPERFAMILY | SSF52047 | RNI-like | 73 | 394 | 6.83E-62 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 301 | 587 | 1.49E-56 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 704 | 998 | 3.14E-70 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 377 | 618 | 3.9E-62 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 139 | 2.4E-24 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 800 | 1021 | 1.3E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 216 | 376 | 3.3E-52 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 140 | 215 | 1.8E-18 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 697 | 799 | 3.4E-16 | - |
| SMART | SM00369 | LRR_typ_2 | 188 | 212 | 15.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 500 | 524 | 220.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 707 | 998 | 5.7E-33 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 548 | 572 | 75.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 428 | 452 | 58.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 453 | 476 | 270.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 284 | 308 | 82.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 332 | 356 | 21.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 707 | 1025 | 36.739227 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 846 | 858 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 713 | 737 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 503 | 516 | 4.1E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 548 | 561 | 4.1E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_051182819.1 | MDIS1-interacting receptor like kinase 1-like [Lolium perenne] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8R7Q6D5 | Protein kinase domain-containing protein OS=Triticum urartu OX=4572 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology