Basic Information
Locus ID:
Oco24G010600
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG24 | 15854639 | 15860206 | + | Oco24G010600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.39 | 107,901.90 Da | 42.92 | 83.62 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05579 | STKc_MAST_like | 615 | 903 | 1.95179E-174 | - |
| Pfam | PF00069 | Protein kinase domain | 609 | 898 | 1.0E-62 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 606 | 939 | 6.07E-90 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 693 | 916 | 1.7E-106 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 607 | 926 | 1.7E-106 | - |
| SMART | SM00220 | serkin_6 | 609 | 898 | 7.0E-104 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 899 | 968 | 9.231607 | IPR000961 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 609 | 898 | 51.311378 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 728 | 740 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 257 | 304 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 940 | 959 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 39 | 55 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 779 | 793 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 779 | 798 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 68 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 940 | 968 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 279 | 304 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G62310.1 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. Encodes a protein with a serine/threonine kinase domain. There are two other closely related members in Arabidopsis. Knock-out mutation results in incomplete root hair elongation. Expression is found all organs examined but is especially strong in elongating root hairs. | 0 |
| RefSeq | XP_015698485.1 | probable serine/threonine protein kinase IRE isoform X1 [Oryza brachyantha] | 0 |
| Q9LE81 | Probable serine/threonine protein kinase IRE OS=Arabidopsis thaliana OX=3702 GN=IRE PE=2 SV=1 | 0 | |
| TrEMBL | J3NF48 | Protein kinase domain-containing protein OS=Oryza brachyantha OX=4533 GN=102722175 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology