Basic Information
Locus ID:
Oco24G010080
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG24 | 15298278 | 15301926 | - | Oco24G010080 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.88 | 42,112.32 Da | 39.15 | 94.87 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 51 | 318 | 5.5862E-93 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 48 | 316 | 6.0E-50 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 28 | 349 | 3.91E-80 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 121 | 326 | 3.5E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 16 | 120 | 1.5E-32 | - |
| SMART | SM00220 | serkin_6 | 45 | 305 | 7.2E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 45 | 331 | 38.180893 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 51 | 73 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 167 | 179 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16670.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_052137965.1 | cold-responsive protein kinase 1-like [Oryza glaberrima] | 0 |
| Q93YN1 | Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0BV30 | Protein kinase domain-containing protein OS=Oryza glumipatula OX=40148 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology