Basic Information
Locus ID:
Oco24G009220
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG24 | 14192139 | 14205992 | - | Oco24G009220 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.95 | 302,283.94 Da | 46.89 | 93.71 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 43 | 373 | 1.2E-109 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 37 | 408 | 1.22E-117 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 32 | 386 | 6.8E-136 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 35 | 382 | 1.6E-162 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 37 | 374 | 121.694344 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 270 | 281 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 109 | 130 | 3.4E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 238 | 255 | 3.4E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 324 | 345 | 3.4E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 271 | 289 | 3.4E-40 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 427 | 449 | - | - |
| Coils | Coil | Coil | 1953 | 2008 | - | - |
| Coils | Coil | Coil | 475 | 502 | - | - |
| Coils | Coil | Coil | 2044 | 2064 | - | - |
| Coils | Coil | Coil | 2257 | 2277 | - | - |
| Coils | Coil | Coil | 381 | 408 | - | - |
| Coils | Coil | Coil | 1253 | 1273 | - | - |
| Coils | Coil | Coil | 1373 | 1393 | - | - |
| Coils | Coil | Coil | 933 | 967 | - | - |
| Coils | Coil | Coil | 653 | 680 | - | - |
| Coils | Coil | Coil | 2395 | 2457 | - | - |
| Coils | Coil | Coil | 1762 | 1782 | - | - |
| Coils | Coil | Coil | 1119 | 1167 | - | - |
| Coils | Coil | Coil | 2218 | 2245 | - | - |
| Coils | Coil | Coil | 2541 | 2561 | - | - |
| Coils | Coil | Coil | 859 | 903 | - | - |
| Coils | Coil | Coil | 2314 | 2334 | - | - |
| Coils | Coil | Coil | 2584 | 2618 | - | - |
| Coils | Coil | Coil | 1568 | 1595 | - | - |
| Coils | Coil | Coil | 770 | 815 | - | - |
| Coils | Coil | Coil | 905 | 925 | - | - |
| Coils | Coil | Coil | 1299 | 1319 | - | - |
| Coils | Coil | Coil | 2128 | 2183 | - | - |
| Coils | Coil | Coil | 2495 | 2522 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G19050.1 | phragmoplast orienting kinesin 2. PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. | 0 |
| RefSeq | XP_052138210.1 | kinesin-like protein KIN-12F isoform X2 [Oryza glaberrima] | 0 |
| B9GE13 | Kinesin-like protein KIN-12F OS=Oryza sativa subsp. japonica OX=39947 GN=KIN12F PE=3 SV=1 | 0 | |
| TrEMBL | A0A6G1BKQ5 | Kinesin motor domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_020147 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology