Basic Information
Locus ID:
Oco24G006780
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Short Name:
WRKY4
Description:
DNA binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG24 | 11540652 | 11545723 | + | Oco24G006780 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.21 | 53,630.68 Da | 55.17 | 57.95 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 238 | 294 | 6.4E-24 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 395 | 452 | 1.8E-25 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 236 | 296 | 2.62E-25 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 386 | 454 | 2.35E-29 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 378 | 455 | 1.8E-35 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 223 | 297 | 1.6E-27 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 237 | 295 | 2.5E-34 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 394 | 453 | 1.1E-39 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 238 | 296 | 23.192444 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 389 | 454 | 37.412945 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 340 | 377 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 287 | 323 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 15 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 347 | 369 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 56 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 448 | 492 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 455 | 492 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 304 | 322 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G03340.1 | WRKY DNA-binding protein 3. Encodes WRKY DNA-binding protein 3 (WRKY3). | 0 |
| RefSeq | XP_006664581.3 | probable WRKY transcription factor 3 [Oryza brachyantha] | 0 |
| Q9ZQ70 | Probable WRKY transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=WRKY3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0E0MMT1 | WRKY domain-containing protein OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology