Basic Information
Locus ID:
Oco24G006440
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG24 | 11081642 | 11101385 | - | Oco24G006440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.53 | 36,127.12 Da | 39.34 | 89.29 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 12 | 50 | 1.8E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 12 | 46 | 2.49E-6 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 11 | 59 | 2.8E-6 | - |
| SMART | SM00256 | fbox_2 | 13 | 54 | 0.0033 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 7 | 55 | 9.02057 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_052139695.1 | uncharacterized protein LOC127758108 [Oryza glaberrima] | 0 |
| TrEMBL | A0A0D3HUN8 | F-box domain-containing protein OS=Oryza barthii OX=65489 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology