Basic Information
Locus ID:
Oco24G005580
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Armadillo/beta-catenin-like repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG24 | 9051580 | 9054865 | + | Oco24G005580 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.49 | 13,185.37 Da | 60.15 | 80.34 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 48 | 80 | - | - |
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_040385273.1 | serine/threonine-protein kinase TIO [Oryza brachyantha] | 0 |
| TrEMBL | A0A0D9XYY0 | non-specific serine/threonine protein kinase OS=Leersia perrieri OX=77586 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg34288 |
| Aizoaceae | Mesembryanthemum crystallinum | 3 | gene_16227, gene_19063, gene_20899 |
| Amaranthaceae | Atriplex hortensis | 3 | Ah018627, Ah030779, Ah031451 |
| Amaranthaceae | Beta vulgaris | 2 | BVRB_3g052030, BVRB_7g157410 |
| Amaranthaceae | Salicornia bigelovii | 10 | Sbi_jg15087, Sbi_jg27291, Sbi_jg33244, Sbi_jg41872 ... |
| Amaranthaceae | Salicornia europaea | 5 | Seu_jg26397, Seu_jg27596, Seu_jg27597, Seu_jg7954 ... |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00020065 |
| Amaranthaceae | Suaeda glauca | 6 | Sgl01343, Sgl06420, Sgl71355, Sgl71356, Sgl74949, Sgl74950 |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000000165, gene:ENSEOMG00000044046 |
| Amaranthaceae | Chenopodium quinoa | 4 | CQ.Regalona.r1.3AG0005090, CQ.Regalona.r1.3BG0005110 ... |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30098950, pistato.v30101130 |
| Apiaceae | Apium graveolens | 1 | Ag3G02051 |
| Arecaceae | Cocos nucifera | 1 | COCNU_16G004300 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103704645 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_07.1280.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri16G33559 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT1G50240.2 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10011182m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp1g37070.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB06g031000.2N, BniB07g005040.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq02G1059 |
| Casuarinaceae | Casuarina glauca | 3 | Cgl02G1016, Cgl02G1017, Cgl02G1101 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno05g16220 |
| Dunaliellaceae | Dunaliella salina | 2 | Dusal.0307s00005.v1.0, Dusal.0307s00009.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate01g33610 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-10981 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG03.1796 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00012859, Pov_00028682 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb6G30046 |
| Poaceae | Echinochloa crus-galli | 5 | AH03.395, AH03.4127, BH03.4470, BH03.471, CH07.44 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_7BG0613680 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0109850.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_016888, gene-QYE76_038619 |
| Poaceae | Oryza coarctata | 2 | Oco24G005320, Oco24G005580 |
| Poaceae | Oryza sativa | 1 | LOC_Os12g24550.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_K140200 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0305366 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr13G011840 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G206100 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG010980, gene_TRIDC2BG013430 |
| Poaceae | Triticum aestivum | 3 | TraesCS2A02G095300.1, TraesCS2B02G110500.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb141360_P002 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-33303 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g5828 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG10.363, evm.TU.LG17.359 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc01g34870 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_1_RagTag.594 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-7574, nbisL1-mrna-7578 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-7522 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-5604 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000012l.356 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00011400 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-8446 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-702 |
| Salicaceae | Populus euphratica | 2 | populus_peu02313, populus_peu02320 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132632230 |
| Solanaceae | Solanum chilense | 1 | SOLCI001335100 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107015407 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_9911 |
| Tamaricaceae | Tamarix chinensis | 1 | TC06G1241 |
| Zosteraceae | Zostera marina | 1 | Zosma05g27660.v3.1 |