Basic Information
Locus ID:
Oco24G004690
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Extension to Ser/Thr-type protein kinases
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG24 | 6215101 | 6225862 | + | Oco24G004690 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.05 | 50,310.96 Da | 54.78 | 79.98 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 173 | 254 | 1.7E-20 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 150 | 254 | 4.05E-28 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 199 | 254 | 1.8E-34 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 170 | 198 | 1.8E-34 | - |
| SMART | SM00220 | serkin_6 | 151 | 380 | 1.4E-9 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 104 | 439 | 14.873928 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 234 | 246 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 404 | 439 | - | - |
| Coils | Coil | Coil | 118 | 138 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G20470.3 | - | 0 |
| RefSeq | XP_015619877.1 | serine/threonine-protein kinase tricorner [Oryza sativa Japonica Group] | 0 |
| A2VDV2 | Serine/threonine-protein kinase 38 OS=Bos taurus OX=9913 GN=STK38 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0P0Y950 | Os12g0290100 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0290100 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for Oco24G004690.