Basic Information
Locus ID:
Oco24G003470
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Short Name:
CPK24
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG24 | 3550735 | 3555604 | + | Oco24G003470 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.98 | 65,244.08 Da | 46.35 | 85.13 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 78 | 336 | 4.98067E-136 | - |
| Pfam | PF13499 | EF-hand domain pair | 456 | 514 | 5.9E-12 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 383 | 443 | 7.6E-10 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 79 | 337 | 1.5E-76 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 367 | 515 | 4.04E-39 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 76 | 338 | 8.36E-86 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 345 | 517 | 7.7E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 81 | 164 | 4.6E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 165 | 344 | 4.8E-60 | - |
| SMART | SM00220 | serkin_6 | 79 | 337 | 4.3E-102 | IPR000719 |
| SMART | SM00054 | efh_1 | 456 | 484 | 0.019 | IPR002048 |
| SMART | SM00054 | efh_1 | 489 | 517 | 9.3E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 384 | 412 | 0.0041 | IPR002048 |
| SMART | SM00054 | efh_1 | 420 | 448 | 1.2 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 380 | 415 | 13.871811 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 452 | 487 | 14.401823 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 79 | 337 | 48.936867 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 490 | 520 | 12.755995 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 429 | 441 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 498 | 510 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 85 | 108 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 199 | 211 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 465 | 477 | - | IPR018247 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G57530.1 | calcium-dependent protein kinase 32. Calcium-dependent Protein Kinase. ABA signaling component that regulates the ABA-responsive gene expression via ABF4. AtCPK32 has autophosphorylation activity and can phosphorylate ABF4 in vitro | 0 |
| RefSeq | XP_015698246.2 | calcium-dependent protein kinase 29 [Oryza brachyantha] | 0 |
| Q2QVG8 | Calcium-dependent protein kinase 29 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK29 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6G1BM20 | Calcium-dependent protein kinase 30 OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_017799 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology