Basic Information
Locus ID:
Oco24G000110
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Cytidylyltransferase-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG24 | 68217 | 74315 | - | Oco24G000110 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.43 | 47,309.49 Da | 48.01 | 89.20 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02174 | CCT | 58 | 207 | 1.97153E-79 | IPR041723 |
| CDD | cd02173 | ECT | 258 | 408 | 5.24161E-83 | - |
| Pfam | PF01467 | Cytidylyltransferase-like | 62 | 190 | 1.9E-25 | IPR004821 |
| Pfam | PF01467 | Cytidylyltransferase-like | 261 | 353 | 1.8E-15 | IPR004821 |
| SUPERFAMILY | SSF52374 | Nucleotidylyl transferase | 258 | 393 | 2.68E-24 | - |
| SUPERFAMILY | SSF52374 | Nucleotidylyl transferase | 60 | 193 | 1.54E-27 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 45 | 226 | 1.4E-55 | IPR014729 |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 230 | 422 | 1.9E-56 | IPR014729 |
| TIGRFAM | TIGR00125 | cyt_tran_rel: cytidyltransferase-like domain | 60 | 124 | 1.3E-18 | IPR004821 |
| TIGRFAM | TIGR00125 | cyt_tran_rel: cytidyltransferase-like domain | 259 | 326 | 5.0E-17 | IPR004821 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 207 | 229 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 205 | 229 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 405 | 424 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G38670.1 | phosphorylethanolamine cytidylyltransferase 1. Encodes a mitochondrial ethanolamine-phosphate cytidylyltransferase, involved in phosphatidylethanolamine (PE) biosynthesis. | 0 |
| RefSeq | XP_034604100.1 | ethanolamine-phosphate cytidylyltransferase-like [Setaria viridis] | 0 |
| Q9ZVI9 | Ethanolamine-phosphate cytidylyltransferase OS=Arabidopsis thaliana OX=3702 GN=PECT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0MBV1 | ethanolamine-phosphate cytidylyltransferase OS=Oryza punctata OX=4537 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology