Basic Information
Locus ID:
Oco23G010440
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Wall-associated receptor kinase 5
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG23 | 16398248 | 16404828 | + | Oco23G010440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.55 | 73,302.25 Da | 38.19 | 78.17 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 309 | 347 | 1.1096E-4 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 441 | 511 | 5.2E-10 | IPR001245 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 37 | 101 | 2.2E-10 | IPR025287 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 327 | 361 | 2.95E-5 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 428 | 607 | 2.61E-26 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 508 | 624 | 1.7E-12 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 409 | 507 | 1.4E-25 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 264 | 357 | 7.7E-10 | - |
| SMART | SM00181 | egf_5 | 259 | 308 | 55.0 | IPR000742 |
| SMART | SM00181 | egf_5 | 312 | 358 | 0.79 | IPR000742 |
| SMART | SM00179 | egfca_6 | 309 | 358 | 1.0E-5 | IPR001881 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 437 | 661 | 11.651377 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 443 | 466 | - | IPR017441 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 309 | 342 | - | IPR018097 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 0 |
| RefSeq | XP_052139830.1 | wall-associated receptor kinase 2-like [Oryza glaberrima] | 0 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 0 | |
| TrEMBL | B9GEA6 | Protein kinase domain-containing protein OS=Oryza sativa subsp. japonica OX=39947 GN=OsJ_36873 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology