Basic Information
Locus ID:
Oco23G010090
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Serine threonine-protein kinase HT1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG23 | 16009718 | 16014945 | + | Oco23G010090 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.61 | 37,063.61 Da | 26.65 | 72.36 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 33 | 298 | 3.0E-32 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 26 | 298 | 1.56E-51 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 133 | 316 | 4.6E-40 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 23 | 114 | 1.3E-13 | - |
| SMART | SM00220 | serkin_6 | 33 | 300 | 2.0E-19 | IPR000719 |
| PIRSF | PIRSF000654 | ILK | 155 | 307 | 1.6E-25 | - |
| PIRSF | PIRSF000654 | ILK | 124 | 161 | 110.0 | - |
| PIRSF | PIRSF000654 | ILK | 11 | 121 | 9.5E-8 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 33 | 300 | 27.636929 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 166 | 178 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 9 | 23 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63260.1 | Protein kinase superfamily protein. protein kinase, similar to mammal mixed-lineage kinase and Raf protein kinase | 0 |
| RefSeq | XP_052138976.1 | serine/threonine-protein kinase STY13-like [Oryza glaberrima] | 0 |
| Q9SSA4 | Serine/threonine-protein kinase 54 OS=Arabidopsis thaliana OX=3702 GN=CBC1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0JC59 | Protein kinase domain-containing protein OS=Oryza nivara OX=4536 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology