Basic Information
Locus ID:
Oco23G009320
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Cytosolic domain of 10TM putative phosphate transporter
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG23 | 15010794 | 15016447 | - | Oco23G009320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.12 | 78,914.92 Da | 45.42 | 103.04 | 0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02714 | Calcium-dependent channel, 7TM region, putative phosphate | 342 | 606 | 1.6E-70 | IPR003864 |
| Pfam | PF13967 | Late exocytosis, associated with Golgi transport | 6 | 153 | 1.1E-33 | IPR032880 |
| Pfam | PF14703 | Cytosolic domain of 10TM putative phosphate transporter | 174 | 329 | 7.1E-26 | IPR027815 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 678 | 697 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 679 | 697 | - | - |
| Coils | Coil | Coil | 259 | 286 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01100.1 | hypothetical protein 1. unknown protein, has cDNAs and ESTs associated to it | 0 |
| RefSeq | XP_015620639.1 | CSC1-like protein HYP1 [Oryza sativa Japonica Group] | 0 |
| Q8GUH7 | CSC1-like protein HYP1 OS=Arabidopsis thaliana OX=3702 GN=HYP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1BIG0 | CSC1-like protein HYP1 OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_002403 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology