Basic Information
Locus ID:
Oco23G003940
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Short Name:
CPK24
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG23 | 3973401 | 3976805 | + | Oco23G003940 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.00 | 62,586.04 Da | 45.63 | 83.99 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 75 | 333 | 1.81624E-135 | - |
| Pfam | PF13499 | EF-hand domain pair | 453 | 511 | 2.4E-11 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 380 | 440 | 8.5E-10 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 76 | 334 | 1.1E-75 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 364 | 512 | 4.67E-39 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 73 | 342 | 2.16E-84 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 342 | 514 | 9.6E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 78 | 161 | 2.9E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 162 | 341 | 3.9E-60 | - |
| SMART | SM00054 | efh_1 | 417 | 445 | 1.2 | IPR002048 |
| SMART | SM00054 | efh_1 | 453 | 481 | 0.019 | IPR002048 |
| SMART | SM00054 | efh_1 | 486 | 514 | 2.4E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 381 | 409 | 0.0041 | IPR002048 |
| SMART | SM00220 | serkin_6 | 76 | 334 | 1.0E-98 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 76 | 334 | 48.343239 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 449 | 484 | 14.401823 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 377 | 412 | 14.094975 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 487 | 517 | 12.365459 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 426 | 438 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 495 | 507 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 196 | 208 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 462 | 474 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 34 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12480.1 | calmodulin-domain protein kinase 7. calmodulin-domain protein kinase CDPK isoform 7 (CPK7) | 0 |
| RefSeq | XP_015618703.1 | calcium-dependent protein kinase 29 [Oryza sativa Japonica Group] | 0 |
| Q2QVG8 | Calcium-dependent protein kinase 29 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK29 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6G1BM20 | Calcium-dependent protein kinase 30 OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_017799 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology