Basic Information
Locus ID:
Oco23G003470
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Translocase of chloroplast 159/132, membrane anchor domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG23 | 3291929 | 3295807 | + | Oco23G003470 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.18 | 86,832.97 Da | 39.31 | 83.94 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01853 | Toc34_like | 132 | 380 | 1.07247E-118 | - |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 504 | 766 | 6.5E-111 | IPR024283 |
| Pfam | PF04548 | AIG1 family | 163 | 299 | 1.8E-21 | IPR006703 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 159 | 297 | 2.47E-18 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 148 | 385 | 1.5E-50 | IPR027417 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 160 | 390 | 28.941259 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 57 | 76 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 57 | 82 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G20300.1 | Avirulence induced gene (AIG1) family protein. | 0 |
| RefSeq | XP_052138091.1 | translocase of chloroplast 90, chloroplastic [Oryza glaberrima] | 0 |
| Q6S5G3 | Translocase of chloroplast 90, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC90 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1BLG3 | AIG1-type G domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_016063 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology