Basic Information
Locus ID:
Oco22G011050
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
serine threonine-protein kinase ctr1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG22 | 14560216 | 14567573 | + | Oco22G011050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.06 | 81,205.55 Da | 42.51 | 82.22 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00130 | PAS | 84 | 185 | 5.52485E-13 | IPR000014 |
| CDD | cd13999 | STKc_MAP3K-like | 447 | 693 | 3.59414E-126 | - |
| Pfam | PF00989 | PAS fold | 76 | 182 | 1.5E-13 | IPR013767 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 442 | 693 | 4.2E-66 | IPR001245 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 77 | 185 | 1.92E-19 | IPR035965 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 419 | 693 | 1.35E-82 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 434 | 518 | 2.2E-28 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 85 | 193 | 2.6E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 519 | 718 | 3.3E-62 | - |
| SMART | SM00091 | pas_2 | 75 | 142 | 1.8E-8 | IPR000014 |
| SMART | SM00220 | serkin_6 | 441 | 700 | 1.6E-58 | IPR000719 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 75 | 185 | 1.8E-13 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 441 | 700 | 43.085392 | IPR000719 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 73 | 144 | 17.185368 | IPR000014 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 560 | 572 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 620 | 642 | 3.1E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 664 | 686 | 3.1E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 515 | 528 | 3.1E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 554 | 572 | 3.1E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 601 | 611 | 3.1E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 270 | 319 | - | - |
| Coils | Coil | Coil | 3 | 23 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49470.3 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_015698166.2 | probable serine/threonine-protein kinase DDB_G0271682 [Oryza brachyantha] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1C8X6 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_024314 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology