Basic Information
Locus ID:
Oco22G010390
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Short Name:
NHX1
Description:
Belongs to the monovalent cation proton antiporter 1 (CPA1) transporter (TC 2.A.36) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG22 | 13934321 | 13938552 | - | Oco22G010390 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.23 | 59,892.69 Da | 38.60 | 114.31 | 0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 24 | 440 | 8.0E-58 | IPR006153 |
| Gene3D | G3DSA:6.10.140.1330 | - | 142 | 193 | 1.5E-14 | - |
| TIGRFAM | TIGR00840 | b_cpa1: sodium/hydrogen exchanger 3 | 20 | 443 | 5.5E-77 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 149 | 159 | 2.1E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 80 | 91 | 2.1E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 94 | 108 | 2.1E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 109 | 117 | 2.1E-11 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05030.1 | sodium hydrogen exchanger 2. member of Sodium proton exchanger family | 0 |
| RefSeq | XP_006663078.1 | sodium/hydrogen exchanger 2-like [Oryza brachyantha] | 0 |
| Q9SXJ8 | Sodium/hydrogen exchanger 1 OS=Oryza sativa subsp. japonica OX=39947 GN=NHX1 PE=2 SV=1 | 0 | |
| TrEMBL | J3N9W2 | Sodium/hydrogen exchanger OS=Oryza brachyantha OX=4533 GN=102711105 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology