Basic Information
Locus ID:
Oco22G010320
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG22 | 13859108 | 13860274 | + | Oco22G010320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.15 | 40,585.57 Da | 48.72 | 100.33 | 0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 23 | 61 | 6.1E-6 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 39 | 345 | 2.61E-38 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 23 | 186 | 2.3E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 188 | 348 | 2.0E-19 | IPR032675 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 165 | 187 | 7.273015 | IPR001611 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03440.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_040385006.1 | probable inactive leucine-rich repeat receptor kinase XIAO [Oryza brachyantha] | 0 |
| TrEMBL | A0A8J6BQW6 | LRRNT_2 domain-containing protein OS=Zizania palustris OX=103762 GN=GUJ93_ZPchr0011g28306 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology