halophFGD

Basic Information

Locus ID: Oco22G010260

Species & Taxonomic ID: Oryza coarctata & 77588

Genome Assembly: GCA_030770085.1

Description: hydroxycinnamoyltransferase activity

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
LG22	13807011	13810658	-	Oco22G010260

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.46	44,326.13 Da	35.65	88.55	-0.19

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF52047	RNI-like	171	344	2.2E-6	-
SUPERFAMILY	SSF81383	F-box domain	13	49	2.75E-5	IPR036047
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	159	370	2.6E-6	IPR032675

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K13065 (shikimate O-hydroxycinnamoyltransferase [EC:2.3.1.133])

Pathway:

ko00940 (Phenylpropanoid biosynthesis) map00940 (Phenylpropanoid biosynthesis) ko00941 (Flavonoid biosynthesis) map00941 (Flavonoid biosynthesis) ko00945 (Stilbenoid, diarylheptanoid and gingerol biosynthesis) map00945 (Stilbenoid, diarylheptanoid and gingerol biosynthesis) ko01100 (Metabolic pathways) map01100 (Metabolic pathways) ko01110 (Biosynthesis of secondary metabolites) map01110 (Biosynthesis of secondary metabolites)

Module:

M00039 (Monolignol biosynthesis, phenylalanine/tyrosine => monolignol)

Reaction:

R01945 (Caffeoyl-CoA + Quinate <=> CoA + Chlorogenate) R02416 (p-Coumaroyl-CoA + Shikimate <=> CoA + 4-Coumaroylshikimate) R07432 (p-Coumaroyl-CoA + Quinate <=> CoA + p-Coumaroyl quinic acid) R07433 (5-O-Caffeoylshikimic acid + CoA <=> Caffeoyl-CoA + Shikimate)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_052137426.1	uncharacterized protein LOC127755831 [Oryza glaberrima]	0
TrEMBL	A2YRR4	F-box domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_28008 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Chenopodium quinoa	1	CQ.Regalona.r1.3AG0024140
Poaceae	Echinochloa crus-galli	12	AH04.2072, BH04.2135, BH04.2138, BH04.2139, BH04.2145 ... CH02.2882, CH02.2897, CH04.2464, CH04.2731, CH05.2892, CH09.2705, CH09.2710
Poaceae	Eleusine coracana subsp. coracana	15	gene-QOZ80_5AG0376310, gene-QOZ80_5BG0423530 ... gene-QOZ80_9AG0671040, gene-QOZ80_9AG0690870, gene-QOZ80_9AG0690880, gene-QOZ80_9AG0690890, gene-QOZ80_9AG0690920, gene-QOZ80_9AG0690960, gene-QOZ80_9AG0691020, gene-QOZ80_9BG0715300, gene-QOZ80_9BG0717160, gene-QOZ80_9BG0717180, gene-QOZ80_9BG0717190, gene-QOZ80_9BG0717200, gene-QOZ80_9BG0717310
Poaceae	Hordeum vulgare	5	HORVU.MOREX.r3.2HG0110910.1 ... HORVU.MOREX.r3.3HG0313920.1.CDS1, HORVU.MOREX.r3.3HG0313940.1.CDS1, HORVU.MOREX.r3.3HG0313960.1.CDS1, HORVU.MOREX.r3.3HG0313970.1.CDS1
Poaceae	Lolium multiflorum	32	gene-QYE76_007082, gene-QYE76_009132, gene-QYE76_009145 ... gene-QYE76_028966, gene-QYE76_036423, gene-QYE76_036427, gene-QYE76_036428, gene-QYE76_036429, gene-QYE76_036430, gene-QYE76_038430, gene-QYE76_038432, gene-QYE76_038433, gene-QYE76_038601, gene-QYE76_038605, gene-QYE76_039894, gene-QYE76_039897, gene-QYE76_048047, gene-QYE76_049316, gene-QYE76_057696, gene-QYE76_057708, gene-QYE76_058077, gene-QYE76_058373, gene-QYE76_058394, gene-QYE76_059048, gene-QYE76_059050, gene-QYE76_060122, gene-QYE76_060933, gene-QYE76_065809, gene-QYE76_065814, gene-QYE76_065817, gene-QYE76_065822, gene-QYE76_065997
Poaceae	Oryza coarctata	4	Oco07G001790, Oco07G002090, Oco21G006700, Oco22G010260
Poaceae	Oryza sativa	13	LOC_Os02g28600.1, LOC_Os04g16160.1, LOC_Os05g46590.1 ... LOC_Os08g24190.1, LOC_Os10g27400.1, LOC_Os11g33190.1, LOC_Os11g33220.1, LOC_Os11g33250.1, LOC_Os11g42230.1, LOC_Os11g42240.1, LOC_Os11g42270.1, LOC_Os11g42280.1, LOC_Os11g42300.1
Poaceae	Paspalum vaginatum	7	gene-BS78_05G225600, gene-BS78_05G225700 ... gene-BS78_05G225900, gene-BS78_09G116100, gene-BS78_09G116300, gene-BS78_10G066500, gene-BS78_10G066600
Poaceae	Puccinellia tenuiflora	25	Pt_Chr0103367, Pt_Chr0103372, Pt_Chr0201689, Pt_Chr0201691 ... Pt_Chr0201692, Pt_Chr0201698, Pt_Chr0305502, Pt_Chr0404387, Pt_Chr0500107, Pt_Chr0500134, Pt_Chr0500208, Pt_Chr0601131, Pt_Chr0601132, Pt_Chr0601137, Pt_Chr0601140, Pt_Chr0601141, Pt_Chr0601142, Pt_Chr0601144, Pt_Chr0601145, Pt_Chr0601146, Pt_Chr0601147, Pt_Chr0700042, Pt_Chr0700227, Pt_Chr0700413, Pt_Chr0700416
Poaceae	Sporobolus alterniflorus	1	Chr16G004490
Poaceae	Thinopyrum elongatum	4	Tel1E01G132800, Tel2E01G165500, Tel3E01G720600 ... Tel3E01G721500
Poaceae	Triticum dicoccoides	5	gene_TRIDC3AG058470, gene_TRIDC3BG072530 ... gene_TRIDC3BG072570, gene_TRIDC3BG072620, gene_TRIDC7BG014460
Poaceae	Triticum aestivum	20	TraesCS1D02G064600.1.cds1, TraesCS1D02G064900.1 ... TraesCS2B02G089900.1.cds1, TraesCS2D02G073300.1.cds1, TraesCS3A02G411400.1.cds1, TraesCS3A02G455200.1, TraesCS3B02G444800.1.cds1, TraesCS3B02G494000.1, TraesCS3B02G494200.1.cds1, TraesCS3B02G494300.1, TraesCS3B02G494700.1, TraesCS3B02G494800.1.cds1, TraesCS3B02G495200.1.cds1, TraesCS3B02G495300.1.cds1, TraesCS3B02G495500.1, TraesCS3D02G405700.1.cds1, TraesCS3D02G447900.1.cds1, TraesCS3D02G448400.1.cds1, TraesCS3D02G448500.1, TraesCS7D02G020200.1.cds1