Basic Information
Locus ID:
Oco22G007240
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG22 | 10270647 | 10271531 | - | Oco22G007240 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.40 | 17,725.31 Da | 18.28 | 117.20 | 0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 52 | 74 | 1.2 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 14 | 163 | 2.52E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 113 | 165 | 4.3E-13 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 4 | 107 | 4.5E-25 | IPR032675 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_015615886.1 | leucine-rich repeat protein 2 [Oryza sativa Japonica Group] | 0 |
| A0A1D6F5N5 | Disease resistance protein BAK6 OS=Zea mays OX=4577 GN=BAK6 PE=1 SV=1 | 0 | |
| TrEMBL | A2ZEN8 | LRRNT_2 domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_36252 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology