Basic Information
Locus ID:
Oco22G004130
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG22 | 4028482 | 4031768 | - | Oco22G004130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 84,553.12 Da | 46.88 | 84.86 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 471 | 763 | 7.81223E-85 | - |
| Pfam | PF00069 | Protein kinase domain | 466 | 700 | 1.0E-41 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 448 | 761 | 4.26E-69 | IPR011009 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 130 | 323 | 8.76E-14 | IPR009091 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 441 | 552 | 5.6E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 553 | 772 | 1.9E-49 | - |
| Gene3D | G3DSA:2.130.10.30 | - | 61 | 342 | 1.2E-17 | IPR009091 |
| SMART | SM00220 | serkin_6 | 465 | 736 | 1.0E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 465 | 765 | 35.707443 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 600 | 612 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 471 | 493 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47850.1 | CRINKLY4 related 4. | 0 |
| RefSeq | XP_040385047.1 | serine/threonine-protein kinase-like protein CCR4 [Oryza brachyantha] | 0 |
| Q9FIJ6 | Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana OX=3702 GN=CCR4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1CAC3 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_027279 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology