Basic Information
Locus ID:
Oco22G003940
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG22 | 3778596 | 3780456 | - | Oco22G003940 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.16 | 32,107.62 Da | 32.89 | 86.25 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 89 | 240 | 2.4E-28 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 18 | 77 | 1.9E-8 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 5 | 248 | 7.42E-56 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 77 | 8.8E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 78 | 248 | 2.3E-41 | - |
| SMART | SM00220 | serkin_6 | 18 | 248 | 1.1E-13 | IPR000719 |
| PIRSF | PIRSF000654 | ILK | 2 | 82 | 7.3E-6 | - |
| PIRSF | PIRSF000654 | ILK | 86 | 251 | 7.8E-14 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 18 | 249 | 26.732353 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 109 | 121 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 24 | 46 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21410.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 29. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_015616468.1 | proline-rich receptor-like protein kinase PERK2 [Oryza sativa Japonica Group] | 0 |
| Q8S9L6 | Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana OX=3702 GN=CRK29 PE=2 SV=1 | 0 | |
| TrEMBL | E0CW92 | Protein kinase-1 OS=Oryza coarctata OX=77588 GN=OC_Ba133A18.2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology