Basic Information
Locus ID:
Oco21G009600
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG21 | 16556326 | 16559127 | + | Oco21G009600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.67 | 58,636.07 Da | 63.02 | 89.77 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 195 | 411 | 7.4E-35 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 169 | 495 | 1.89E-63 | IPR011009 |
| Gene3D | G3DSA:1.20.930.20 | - | 12 | 130 | 2.5E-23 | IPR036537 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 154 | 271 | 4.3E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 273 | 502 | 9.6E-50 | - |
| SMART | SM00220 | serkin_6 | 190 | 471 | 5.5E-13 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 190 | 499 | 31.029089 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 319 | 331 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 502 | 524 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67520.5 | - | 0 |
| RefSeq | XP_052135526.1 | cysteine-rich receptor-like protein kinase 44 [Oryza glaberrima] | 0 |
| Q8GYA4 | Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CRK10 PE=1 SV=3 | 0 | |
| TrEMBL | I1R205 | Protein kinase domain-containing protein OS=Oryza glaberrima OX=4538 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | AH03.800, BH03.918 |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_7AG0562700, gene-QOZ80_7AG0562710 ... |
| Poaceae | Oryza coarctata | 1 | Oco21G009600 |
| Poaceae | Oryza sativa | 1 | LOC_Os11g44860.1 |