Basic Information
Locus ID:
Oco21G009540
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG21 | 16507755 | 16509168 | + | Oco21G009540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.13 | 29,272.36 Da | 50.74 | 91.09 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 82 | 133 | 9.5E-10 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 74 | 241 | 1.17E-32 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 139 | 247 | 1.1E-14 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 65 | 138 | 6.7E-19 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 247 | 12.895168 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 104 | 116 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11340.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_025877311.1 | cysteine-rich receptor-like protein kinase 19 [Oryza sativa Japonica Group] | 0 |
| Q9ZT07 | G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 OS=Arabidopsis thaliana OX=3702 GN=RKS1 PE=3 SV=3 | 0 | |
| TrEMBL | A0A679BCA4 | CRK10 (CYSTEINE-RICH RLK10) kinase-like OS=Oryza glaberrima OX=4538 GN=Ogla0134B22.6 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | AH04.2134, BH04.2218, CH04.2559 |
| Poaceae | Oryza coarctata | 3 | Oco21G009490, Oco21G009540, Oco22G010880 |
| Poaceae | Oryza sativa | 2 | LOC_Os11g44660.1, LOC_Os11g44690.1 |